PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021645021.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 314aa    MW: 35163.2 Da    PI: 6.9876
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021645021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.34e-192875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd llv++++++G g+W++ a++ g++Rt+k+c++rw++yl
   XP_021645021.1 28 RGPWTLEEDNLLVHYIARHGEGRWNLLAKCAGLRRTGKSCRLRWLNYL 75
                     89********************************************97 PP
2Myb_DNA-binding53.36.4e-1781124146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
   XP_021645021.1  81 RGNLTPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 124
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSSVSSSSLS KKSLSSSSDD DSSDKLRRGP WTLEEDNLLV HYIARHGEGR WNLLAKCAGL  60
RRTGKSCRLR WLNYLKPDVK RGNLTPQEQL LILDLHSKWG NRWSKIAQHL PGRTDNEIKN  120
YWRTRVQKQA RHLKVDANST AFQDIIKCFW IPRLLQKIEG SSTSCSSTST SSSSTILSQN  180
PTVVSDQPVN YSAHDLPFPI PPPQLPQEVS GNLQGNLDHN SDSEHGSNSC ISSTESMNIS  240
QISQLSEYPT SPFHPISTFQ KDCYYVDSGC YNMESMTPAT LSVPAGVFQN VAESNWVGYD  300
FGDNIWSMDE LMAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.15e-78MYB family protein