PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645075.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 358aa MW: 40894.4 Da PI: 6.8569

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.6	1e-15	44	104	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++ge XP_021645075.1 44 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqkKKgRQVYLGAYDDEEAAAHAYDLAALKYWGE 104 57*****************999977776447***********************997 PP
2	AP2	51.2	3e-16	146	197	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_021645075.1 146 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 197 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGKLSQQNQK STANINNGRD NNGVTKVKRT RRSVPRDSPP QRSSIYRGVT RHRWTGRYEA 60 HLWDKNCWNE SQKKKGRQVY LGAYDDEEAA AHAYDLAALK YWGEETIINF PLSTYENELK 120 EMDGQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT 180 QEEAATAYDM AAIEYRGLNA VTNFDLSRYI KWLKPNQTDI NNTNNNDPIH PNPNLNIATQ 240 SSPIPDHELG LSFLHKQQTF QTPTDETALV DPRPANATSA LGLLLQSPKF KEMMEMTSMA 300 DCPSTPVDHL LDPPQCRFPE DIQTYFECQD PSNSYGEGDD MIFGELNSFV PQMFQSDF

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGKLSQQNQK STANINNGRD NNGVTKVKRT RRSVPRDSPP QRSSIYRGVT RHRWTGRYEA  60
HLWDKNCWNE SQKKKGRQVY LGAYDDEEAA AHAYDLAALK YWGEETIINF PLSTYENELK  120
EMDGQSREEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT  180
QEEAATAYDM AAIEYRGLNA VTNFDLSRYI KWLKPNQTDI NNTNNNDPIH PNPNLNIATQ  240
SSPIPDHELG LSFLHKQQTF QTPTDETALV DPRPANATSA LGLLLQSPKF KEMMEMTSMA  300
DCPSTPVDHL LDPPQCRFPE DIQTYFECQD PSNSYGEGDD MIFGELNSFV PQMFQSDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-106	AP2 family protein