PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645533.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 449aa MW: 49578.2 Da PI: 5.5416

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.6	9.3e-08	353	393	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L+ l+P K++ a++L +A +Y+k L XP_021645533.1 353 ARQRRERISERIRVLQNLVPGG-----SKMDTASMLDEAANYLKFL 393 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDSLGWDNSQ VLTNTSPLWS NPQHASPLWS NQENEESLNI ASNSNSCLFG RKMDLTEDIF 60 NQFQDLQKRQ EATRIAEISV AAKSGAEMSW RDASTQELYS SLSIDKPYAI TTPTITGFSM 120 SINQSRIINS LPNGKAGVSV AGSLESFDCL LSATNSNTDT SVEDDGISMI FSDCRNLWNF 180 GANSAVSSGE SENNTSNARN KEMHCRLISE LDEAVSQSSS DKKSSPTKPV SIKRSDDRSE 240 LNVGANNKYP HFDLLQTDCS TSDGGFRLLS ENPPKPKRFR SDKPPGSSNI NFQQPSSSVS 300 ASIEEVDPEA IEQMKEMIYR AAAFRPVNFG LEVVEKPKRK NVRISTDPQT VAARQRRERI 360 SERIRVLQNL VPGGSKMDTA SMLDEAANYL KFLRSQVKAL ENLGHTLDCP PTNIAFSSLP 420 FDNLSFPMQT HHLFTPKPKS CSPPSELKS

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDSLGWDNSQ VLTNTSPLWS NPQHASPLWS NQENEESLNI ASNSNSCLFG RKMDLTEDIF  60
NQFQDLQKRQ EATRIAEISV AAKSGAEMSW RDASTQELYS SLSIDKPYAI TTPTITGFSM  120
SINQSRIINS LPNGKAGVSV AGSLESFDCL LSATNSNTDT SVEDDGISMI FSDCRNLWNF  180
GANSAVSSGE SENNTSNARN KEMHCRLISE LDEAVSQSSS DKKSSPTKPV SIKRSDDRSE  240
LNVGANNKYP HFDLLQTDCS TSDGGFRLLS ENPPKPKRFR SDKPPGSSNI NFQQPSSSVS  300
ASIEEVDPEA IEQMKEMIYR AAAFRPVNFG LEVVEKPKRK NVRISTDPQT VAARQRRERI  360
SERIRVLQNL VPGGSKMDTA SMLDEAANYL KFLRSQVKAL ENLGHTLDCP PTNIAFSSLP  420
FDNLSFPMQT HHLFTPKPKS CSPPSELKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	354	359	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	7e-74	bHLH family protein