PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021645596.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 212aa    MW: 24740.8 Da    PI: 9.1926
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021645596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.51.1e-151152950
                    HHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  9 rqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    r+  f kR++++ KKAeELS LC++ v++i + ++gk+ +++
  XP_021645596.1 11 RKAIFRKRKETLKKKAEELSSLCGVPVCLICYQPDGKIDTWP 52
                    666799***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MNRNNGPLTP RKAIFRKRKE TLKKKAEELS SLCGVPVCLI CYQPDGKIDT WPEDKKEVDD  60
ILMKYTREEN INLQPAVGFL DAENNNQASV VIKNENRKEK KEKKKKKVFE TWDTRLDNLP  120
EESLMDILTV LEEKEEILEE RILQPKQIHE IKDFLLTARR KDARSVKIKR SKDVVKFKVC  180
CSKYLYTLCV FDSEKADKLK QSLPLGLSVQ DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41200.12e-12M-type_MADS family protein