PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021645883.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GATA

Protein Properties

Length: 161aa MW: 18034.8 Da PI: 10.6319

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021645883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	59.2	5.4e-19	26	60	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+tt TplWR gp g+k+LCnaCG++yrkk++ XP_021645883.1 26 CTDCKTTRTPLWRGGPAGPKSLCNACGIRYRKKRR 60 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MMDDVGERKS LHDKEEYKNI EIKKSCTDCK TTRTPLWRGG PAGPKSLCNA CGIRYRKKRR 60 AMLSLDKDKD SDKKKRRGHS ATTLTTTTAN SSTIATSASS VNDGSVLGES LKMRLIVVGE 120 KMMFERSSIV RKQRCQRKRR LREEEQAAFS LMALSCGSVL A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	77	RKKRRAMLSLDKDKDSDKKKRR
2	57	78	RKKRRAMLSLDKDKDSDKKKRR
3	58	79	RKKRRAMLSLDKDKDSDKKKRR
4	67	76	KDKDSDKKKR
5	73	77	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	2e-21	GATA family protein