PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646320.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HRT-like

Protein Properties

Length: 653aa MW: 72540.1 Da PI: 8.8504

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	55	1.4e-17	275	305	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+i++d ++C+r+Pv+gRKRCe HKGmRi XP_021646320.1 275 ICGFIMNDSIPCRRPPVPGRKRCEGHKGMRI 305 8*****************************7 PP
2	HRT-like	61.7	1.1e-19	339	369	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+l+dG++C+rq+v+gRKRCeeHKGmR+ XP_021646320.1 339 TCGVNLGDGIFCRRQAVPGRKRCEEHKGMRV 369 7*****************************7 PP
3	HRT-like	46.9	4.5e-15	424	453	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 iCG+il++Gs+C+rqP +g+K C++HKG R XP_021646320.1 424 ICGAILGNGSFCRRQPTQGNKQCWQHKGWR 453 8***************************87 PP
4	HRT-like	53.4	4.2e-17	498	527	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 iCG++l++Gs+C+rqP +g+KRC++HKG+R XP_021646320.1 498 ICGATLGNGSFCRRQPTQGNKRCWQHKGRR 527 8****************************9 PP
5	HRT-like	51.6	1.6e-16	572	601	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 iCG++l++G +C+rqP +g+KRC++HKG+R XP_021646320.1 572 ICGATLGNGLFCRRQPTQGNKRCWQHKGRR 601 8****************************9 PP
6	HRT-like	61.5	1.3e-19	618	648	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+l++GsvC+r Pv+gRKRCe+HKGmR+ XP_021646320.1 618 TCGVALQNGSVCMRAPVHGRKRCEQHKGMRV 648 7*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MEEGEESAAP TASASRLKRE DYKRTKHDSH FSKWQVLIGP TDWEDYSQGK EGATRYRVHN 60 LPASSGPGLY ELGVAVSRSG LERVFGKLDP YDIVVVYLGQ ADNVRSRLQH YGRSGAHLAN 120 AYATGHWDTK NDSPQKGLGL FEEIFSGGHS IVFRWASMKD KRNAEKTEAQ LLDTFDYAWN 180 KGSNGARRPN DILLNISKIA LSSNRFSSIS KRLLFQRLGQ GVIKIEANKP LSPEKCTIPA 240 DEDEKSFLIG IFKFNRSQPR LVSDKCGIDQ DFIHICGFIM NDSIPCRRPP VPGRKRCEGH 300 KGMRIYGSSS KPISEGNSNY LPGVHLDPST HYDHDHATTC GVNLGDGIFC RRQAVPGRKR 360 CEEHKGMRVN SCVSKPIAEE ECHPANSGSM DWTNNIVSSG SSMYQGLQFH SPNDVSIDEH 420 FSSICGAILG NGSFCRRQPT QGNKQCWQHK GWRGDSNLSG SSISRFDTVT CWQHKGMYQG 480 LQFHSPNDVS IDEHCSSICG ATLGNGSFCR RQPTQGNKRC WQHKGRRGDS SLSGSSISRF 540 DTVTCWQHEG MYQGLQFHSP NEVSIDEHFS SICGATLGNG LFCRRQPTQG NKRCWQHKGR 600 RGDGSLSGSS ISRFDTVTCG VALQNGSVCM RAPVHGRKRC EQHKGMRVST SFS

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MEEGEESAAP TASASRLKRE DYKRTKHDSH FSKWQVLIGP TDWEDYSQGK EGATRYRVHN  60
LPASSGPGLY ELGVAVSRSG LERVFGKLDP YDIVVVYLGQ ADNVRSRLQH YGRSGAHLAN  120
AYATGHWDTK NDSPQKGLGL FEEIFSGGHS IVFRWASMKD KRNAEKTEAQ LLDTFDYAWN  180
KGSNGARRPN DILLNISKIA LSSNRFSSIS KRLLFQRLGQ GVIKIEANKP LSPEKCTIPA  240
DEDEKSFLIG IFKFNRSQPR LVSDKCGIDQ DFIHICGFIM NDSIPCRRPP VPGRKRCEGH  300
KGMRIYGSSS KPISEGNSNY LPGVHLDPST HYDHDHATTC GVNLGDGIFC RRQAVPGRKR  360
CEEHKGMRVN SCVSKPIAEE ECHPANSGSM DWTNNIVSSG SSMYQGLQFH SPNDVSIDEH  420
FSSICGAILG NGSFCRRQPT QGNKQCWQHK GWRGDSNLSG SSISRFDTVT CWQHKGMYQG  480
LQFHSPNDVS IDEHCSSICG ATLGNGSFCR RQPTQGNKRC WQHKGRRGDS SLSGSSISRF  540
DTVTCWQHEG MYQGLQFHSP NEVSIDEHFS SICGATLGNG LFCRRQPTQG NKRCWQHKGR  600
RGDGSLSGSS ISRFDTVTCG VALQNGSVCM RAPVHGRKRC EQHKGMRVST SFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-108	HRT-like family protein