PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646492.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 470aa MW: 52866 Da PI: 7.0382

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	300	345	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YIk+L XP_021646492.1 300 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIKEL 345 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEEITSPSST SSFMSFCQDT CPPLQQRLQF ILQSRPEWWV YAIFWQASKD ATGRLVLSWG 60 DGHFRGTKEF AAKACNKLNQ PKFGFNLERK MINKESPTIF GDDMDMDRLA DVEVIDYEWF 120 YTVSVTRSFA VEDGILGRAF GSGAFIWLTG NHELQMFGCE RVKEARMHGI QTLACISTTC 180 GVVELGSSNT IDKDWSLVQL CKSLFEGDSA CLVSKEPSHD SQLHILNTSF LDISMFSASQ 240 KETSTEKQIE GDKKKDVTGQ GRSSSDSARS DSDGNFAAGN TDRFKKRGRK QLNGKELPLN 300 HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIKELKAKVD ELESKLQAVS 360 KKSKSTNVAD NQSTDSMIDH IRASSIYKTK AMELEVKIVG SEAMIRFLSP DVNYPAARLM 420 DVLREIEFKV HHASMSSIKE MVLQDVVARV PDGLTNEDVV RSAILQRMQN

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEEITSPSST SSFMSFCQDT CPPLQQRLQF ILQSRPEWWV YAIFWQASKD ATGRLVLSWG  60
DGHFRGTKEF AAKACNKLNQ PKFGFNLERK MINKESPTIF GDDMDMDRLA DVEVIDYEWF  120
YTVSVTRSFA VEDGILGRAF GSGAFIWLTG NHELQMFGCE RVKEARMHGI QTLACISTTC  180
GVVELGSSNT IDKDWSLVQL CKSLFEGDSA CLVSKEPSHD SQLHILNTSF LDISMFSASQ  240
KETSTEKQIE GDKKKDVTGQ GRSSSDSARS DSDGNFAAGN TDRFKKRGRK QLNGKELPLN  300
HVEAERQRRE RLNHRFYALR SVVPNVSKMD KASLLADAVT YIKELKAKVD ELESKLQAVS  360
KKSKSTNVAD NQSTDSMIDH IRASSIYKTK AMELEVKIVG SEAMIRFLSP DVNYPAARLM  420
DVLREIEFKV HHASMSSIKE MVLQDVVARV PDGLTNEDVV RSAILQRMQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	311	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-64	bHLH family protein