PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646834.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 214aa MW: 24801.6 Da PI: 9.5132

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.9	8.5e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021646834.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP
2	K-box	77.1	4.5e-26	82	170	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + ++++++ ++++ L k+ie L+ ++R+llG++Le++s+ eLqqLe+qLe+sl++iR++Kn+l++eqie+l++ ek l een++Lr+k XP_021646834.1 82 AVQENMQNGKEDSFSLAKKIELLEISKRKLLGDELEPCSIDELQQLENQLERSLTRIRTRKNQLFREQIERLKEEEKILIEENTRLRAK 170 4567899********************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MVRGRTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSC 60 SINKTIERYQ KKAKDLGISI KAVQENMQNG KEDSFSLAKK IELLEISKRK LLGDELEPCS 120 IDELQQLENQ LERSLTRIRT RKNQLFREQI ERLKEEEKIL IEENTRLRAK CGLQPLDLST 180 TQEKQQIADG ESMEVETELF IGPRPPETRT TQKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	2e-74	MIKC_MADS family protein