PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647084.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 260aa    MW: 29442.9 Da    PI: 9.0409
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.19.1e-15871453696
                     EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     l  +d++g+ W++k+ +r++++r++lt+GWk F+++++L  gD++ F   + +++ l+v++
  XP_021647084.1  87 LDATDLQGNNWRFKHVFRGTPKRHLLTEGWKAFASSKKLAKGDVLNFL--RGETGPLLVGL 145
                     56789******************************************9..34788778775 PP
2Auxin_resp774.7e-26175254383
      Auxin_resp   3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                      a++ +++F+ +Y+Pr  +seF+v+v+k+++a + ++ +G+ f m++e+e++ e+r++G +vg +d   ++W +S+Wrs+k
  XP_021647084.1 175 MAIKIGTPFHFIYKPRENKSEFMVNVNKYLEAQNLNFPIGTSFSMRLEGEEVLEQRFTGHIVGSQDN-VSSWAGSEWRSIK 254
                     688999************************************************************5.55********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDYSTVARPH ANYGDALKKK ILDICAGGTL PCRGEQFYYF PEGHIEKLGG PMVRGLELPF  60
ELPSKILCEV MNVYHMELSE EVPYQYLDAT DLQGNNWRFK HVFRGTPKRH LLTEGWKAFA  120
SSKKLAKGDV LNFLRGETGP LLVGLKKLMK QDTNGTPSIK SLKDKCVGTL SSAFMAIKIG  180
TPFHFIYKPR ENKSEFMVNV NKYLEAQNLN FPIGTSFSMR LEGEEVLEQR FTGHIVGSQD  240
NVSSWAGSEW RSIKVHVYLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-57ARF family protein