PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647249.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 384aa MW: 42714.6 Da PI: 7.61

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	83	128	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_021647249.1 83 RGHWKPAEDTKLKELVALYGPQNWNLIAEKLK-GRSGKSCRLRWFNQ 128 899**************************9.*********996 PP
2	Myb_DNA-binding	53	7.8e-17	135	179	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++++eE+ +l a++ +G++ W++Iar ++ gRt++ +k++w+ + XP_021647249.1 135 RSAFSEEEEARLMTAHRIYGNK-WALIARLFP-GRTDNAVKNHWHVL 179 789*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MNIHCTSSME TFTDMASHNI CYCDPLNHKG HHHMAFQLMP NCTCSLESNQ NNDVNDKCNA 60 DQRSVIGGQE LIKHRPSSKV CARGHWKPAE DTKLKELVAL YGPQNWNLIA EKLKGRSGKS 120 CRLRWFNQLD PRINRSAFSE EEEARLMTAH RIYGNKWALI ARLFPGRTDN AVKNHWHVLM 180 ARKYREQSVA YRSRKQTEAA TRGVEDGSAS LSRDTDMNVV EAKSPNLCNA RMIKPSHHFR 240 LAGSKGFCDV TSTEEAATSG KVLFVRSSNL LSLPHGSCAE QTPFDLFSGH ESYDIGSQNG 300 TTFTVSHNML QSSNHHFSAG FSDSMASPTS QVSASEPSSS SSLSSAENNA TRHSETTISP 360 PFIDFLGVGP LEEFEVNTER SRES

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MNIHCTSSME TFTDMASHNI CYCDPLNHKG HHHMAFQLMP NCTCSLESNQ NNDVNDKCNA  60
DQRSVIGGQE LIKHRPSSKV CARGHWKPAE DTKLKELVAL YGPQNWNLIA EKLKGRSGKS  120
CRLRWFNQLD PRINRSAFSE EEEARLMTAH RIYGNKWALI ARLFPGRTDN AVKNHWHVLM  180
ARKYREQSVA YRSRKQTEAA TRGVEDGSAS LSRDTDMNVV EAKSPNLCNA RMIKPSHHFR  240
LAGSKGFCDV TSTEEAATSG KVLFVRSSNL LSLPHGSCAE QTPFDLFSGH ESYDIGSQNG  300
TTFTVSHNML QSSNHHFSAG FSDSMASPTS QVSASEPSSS SSLSSAENNA TRHSETTISP  360
PFIDFLGVGP LEEFEVNTER SRES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	4e-72	MYB family protein