PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647468.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 398aa MW: 45894.2 Da PI: 6.5173

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85	9.6e-27	83	164	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rr+m+ ++++k++k+lW+++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s ++ y+++++ XP_021647468.1 83 WVQDETRSLIALRRDMDGLFNTSKSNKHLWDQISAKMREKGFDRSPTMCTDKWRNLLKEFKKSKHQDRGS---GSAKMFYYKEID 164 *******************************************************************984...455789999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MYLSEKPRPI DFYKEEVLPT TTRDNMIIEV DSTSGDLTPH QHHLHNPHQQ QQQQHQQQQM 60 ILGESSGEDN HEVKAPKKRA ETWVQDETRS LIALRRDMDG LFNTSKSNKH LWDQISAKMR 120 EKGFDRSPTM CTDKWRNLLK EFKKSKHQDR GSGSAKMFYY KEIDEILRER SKNAQYKSPT 180 PTSKVDSYMQ FADKGFDDTS ISFGPVEVPW CAASGRPTLN LERRLDHDGH PLAITAAEAV 240 AASAVPPWNW RETPGNGAES QSFGGRVITV KYGDYTRRIG IDGTADAIKE AIKSAFRLRT 300 KRAFWLEDED QIIRSLDKDM PVGNYTLHLD EGLAVKVCLY DESDHIPVHT EEKIFYTEDD 360 YRDFLNRRGW SCLREFDGYR NIDNMDDLRP GAIYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MYLSEKPRPI DFYKEEVLPT TTRDNMIIEV DSTSGDLTPH QHHLHNPHQQ QQQQHQQQQM  60
ILGESSGEDN HEVKAPKKRA ETWVQDETRS LIALRRDMDG LFNTSKSNKH LWDQISAKMR  120
EKGFDRSPTM CTDKWRNLLK EFKKSKHQDR GSGSAKMFYY KEIDEILRER SKNAQYKSPT  180
PTSKVDSYMQ FADKGFDDTS ISFGPVEVPW CAASGRPTLN LERRLDHDGH PLAITAAEAV  240
AASAVPPWNW RETPGNGAES QSFGGRVITV KYGDYTRRIG IDGTADAIKE AIKSAFRLRT  300
KRAFWLEDED QIIRSLDKDM PVGNYTLHLD EGLAVKVCLY DESDHIPVHT EEKIFYTEDD  360
YRDFLNRRGW SCLREFDGYR NIDNMDDLRP GAIYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein