PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647640.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 695aa MW: 76596.5 Da PI: 8.746

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	595	644	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_021647640.1 595 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 644 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKVGENQ MCAFDLLAIV AGNLLLDKES 60 PPSSSDTSAD KDHCMVVNDN VKNEWQYDEK NMKIQVHDQG SPARSFFVSE LVSLGNERNH 120 CSKESLYAQN GLNSGLGCTV ATSECAERID SEMLVNSKSK NEIGTFAGKL HVGSSGHWEF 180 DDCKLEHETG KVINDEPDKS GKVQCGTVAN VCSSEDPVVW DGKPHALVSS DSSAKVPLCG 240 NNISHSSYPS NGDDVSVDGR DDDENSSGCT HPSTTKEFFR PAPRVGDRRI RKVLASKYWK 300 VAPRLNDVTL SNTDGADSKP LCHKRKNYYK YQKSERLYPF KKRKHFACGS QLNSEGWISN 360 EFVCHSPKKG CNGDAAGSCS KMHAAIGASS SVAGQHSSFR PRHSHVKLRI KSFMVPELFI 420 EVPESATVGL LKRTVMEAVT AILGGGLRVG VLLQGKKVWD DDKTLVQTGI CQNNQLDALG 480 FSLEPNSSRA PPSLCPVDSS FLIDTAQPVS RYPPAPSVVH QTTYAASPEP HGTNLGNLIE 540 SDHDSAPSPT DMSFDKSTTD SKALVPVPEM NIEALAVVPA HLKSKRSAIV QRRIRRPFSV 600 AEVEALVQAV EKLGTGRWRD VKLRAFDNAK HRTYVDLKDK WKTLVHTARI SPQQRRGEPV 660 PQKLLDRVLT AHAYWSQQQA KQQLKQQQPE ICLLL

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MVLQKRLDYG FNGYQVPPTP RATRSARRRG SFKKKVGENQ MCAFDLLAIV AGNLLLDKES  60
PPSSSDTSAD KDHCMVVNDN VKNEWQYDEK NMKIQVHDQG SPARSFFVSE LVSLGNERNH  120
CSKESLYAQN GLNSGLGCTV ATSECAERID SEMLVNSKSK NEIGTFAGKL HVGSSGHWEF  180
DDCKLEHETG KVINDEPDKS GKVQCGTVAN VCSSEDPVVW DGKPHALVSS DSSAKVPLCG  240
NNISHSSYPS NGDDVSVDGR DDDENSSGCT HPSTTKEFFR PAPRVGDRRI RKVLASKYWK  300
VAPRLNDVTL SNTDGADSKP LCHKRKNYYK YQKSERLYPF KKRKHFACGS QLNSEGWISN  360
EFVCHSPKKG CNGDAAGSCS KMHAAIGASS SVAGQHSSFR PRHSHVKLRI KSFMVPELFI  420
EVPESATVGL LKRTVMEAVT AILGGGLRVG VLLQGKKVWD DDKTLVQTGI CQNNQLDALG  480
FSLEPNSSRA PPSLCPVDSS FLIDTAQPVS RYPPAPSVVH QTTYAASPEP HGTNLGNLIE  540
SDHDSAPSPT DMSFDKSTTD SKALVPVPEM NIEALAVVPA HLKSKRSAIV QRRIRRPFSV  600
AEVEALVQAV EKLGTGRWRD VKLRAFDNAK HRTYVDLKDK WKTLVHTARI SPQQRRGEPV  660
PQKLLDRVLT AHAYWSQQQA KQQLKQQQPE ICLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	324	344	KRKNYYKYQKSERLYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-110	MYB_related family protein