PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648039.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 803aa MW: 91829.7 Da PI: 8.3498

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.4	3.1e-20	71	145	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY +YA ++GF++r+ + ++s+++g++ +r+fvCskeg++ + +rtgC a ++v+++++gkw++++++++HnHel XP_021648039.1 71 EFYGAYAMRIGFRIRTGQLYRSRTDGSVSSRRFVCSKEGFQLN--------------SRTGCPAFIRVQRRDSGKWVIDQIHKDHNHEL 145 6*************************************876..............589*************************98 PP
2	FAR1	64.6	2.7e-20	236	310	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA +GF++r+ + +sk++g+it+r+fvCskeg++++ +r+gC a +++k++++g+w v++l++ HnH+l XP_021648039.1 236 QFYQIYADGAGFRIRIGQLFRSKNDGSITSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRQESGTWIVDRLQKSHNHDL 310 6*************************************999..............4899************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MGFHSSSGLF TNIRSSDANP NSEECGTAMI VKAYPLGMVR VNNGVNGGDG GESRLEPCIG 60 LEFDSADDAR EFYGAYAMRI GFRIRTGQLY RSRTDGSVSS RRFVCSKEGF QLNSRTGCPA 120 FIRVQRRDSG KWVIDQIHKD HNHELGLVDE SHTPILQQRT PKAKKSSAEV SQRPKFKPTD 180 VSQRPKFKLI EDVDNERPCP SGVINVKRLK RGGDEGPLNA EPYAGLAFNS ADEAYQFYQI 240 YADGAGFRIR IGQLFRSKND GSITSRRFVC SKEGFQHPSR VGCGAFMRIK RQESGTWIVD 300 RLQKSHNHDL ELQTGTQQKS YNTSKKFIDD ANGDVNDGLD SVDIAKIYYG SPSRGARENN 360 IGSDWYKLLL DYFQTRQAED TGFFYSVEAD NGSCMSVFWA DGRSRFSCSQ FGDAIVFDTS 420 YRKSNYVVPF ATLVGVNHHK QPVLLACALI ANMSQESVTW LFQTWLRAMS GCRPKSIIAD 480 QDAAIQQAIA KVFPGTHHRF SMWQIRAKER ENFRSMTEEF KYEYEKCIYQ SQTSVDFKTM 540 WSALINKYAL KENAWLREMY EKRESWVPLY LGGKFCAGIP VSEGLESFFG TYLNAQTPLA 600 EFISRYEQGL ARRRDEERQE DFNCYNLQAF LHTKEPVEEQ GRRLYTLTAF KIFQNELLQC 660 YNYLGIKTYE EGTISRYSVR RCGNETERHA VTFSASNLNV CCSCQMFEFE GILCRHVLRV 720 FNLLDIREIP PCYILHRWTK NAEYGTIRDI ESGVSPQELK SLIMWSLRET ACKFVEAGTA 780 SLEKYKIAYE IMREGGIKLR WQR

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MGFHSSSGLF TNIRSSDANP NSEECGTAMI VKAYPLGMVR VNNGVNGGDG GESRLEPCIG  60
LEFDSADDAR EFYGAYAMRI GFRIRTGQLY RSRTDGSVSS RRFVCSKEGF QLNSRTGCPA  120
FIRVQRRDSG KWVIDQIHKD HNHELGLVDE SHTPILQQRT PKAKKSSAEV SQRPKFKPTD  180
VSQRPKFKLI EDVDNERPCP SGVINVKRLK RGGDEGPLNA EPYAGLAFNS ADEAYQFYQI  240
YADGAGFRIR IGQLFRSKND GSITSRRFVC SKEGFQHPSR VGCGAFMRIK RQESGTWIVD  300
RLQKSHNHDL ELQTGTQQKS YNTSKKFIDD ANGDVNDGLD SVDIAKIYYG SPSRGARENN  360
IGSDWYKLLL DYFQTRQAED TGFFYSVEAD NGSCMSVFWA DGRSRFSCSQ FGDAIVFDTS  420
YRKSNYVVPF ATLVGVNHHK QPVLLACALI ANMSQESVTW LFQTWLRAMS GCRPKSIIAD  480
QDAAIQQAIA KVFPGTHHRF SMWQIRAKER ENFRSMTEEF KYEYEKCIYQ SQTSVDFKTM  540
WSALINKYAL KENAWLREMY EKRESWVPLY LGGKFCAGIP VSEGLESFFG TYLNAQTPLA  600
EFISRYEQGL ARRRDEERQE DFNCYNLQAF LHTKEPVEEQ GRRLYTLTAF KIFQNELLQC  660
YNYLGIKTYE EGTISRYSVR RCGNETERHA VTFSASNLNV CCSCQMFEFE GILCRHVLRV  720
FNLLDIREIP PCYILHRWTK NAEYGTIRDI ESGVSPQELK SLIMWSLRET ACKFVEAGTA  780
SLEKYKIAYE IMREGGIKLR WQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein