PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021648239.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 283aa    MW: 32367.3 Da    PI: 8.4324
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021648239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.7e-082166346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT eE + + +a + +  +   +W+++a++++ g+t  +++  ++ 
   XP_021648239.1 21 EWTREENKEFERALAIYDEHepdRWTKVAAMIP-GKTVVDVIKQYRE 66
                     7*****************99*************.*******999986 PP
2Myb_DNA-binding39.51.3e-12121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ +++ +  ++G+g+W+ I+r +   +t+ q+ s+ qky
   XP_021648239.1 121 PWTEDEHRRFLLGLLKHGKGDWRNISRNFVVSKTPTQVASHAQKY 165
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
METSYPSLYM SNSNWFSQST EWTREENKEF ERALAIYDEH EPDRWTKVAA MIPGKTVVDV  60
IKQYRELEED VCNIEAGKVA IPGYLSSPFT LDWIENRNFD AYRKKPLATK NGDQERKKGV  120
PWTEDEHRRF LLGLLKHGKG DWRNISRNFV VSKTPTQVAS HAQKYFIRQQ LSGAKDKRRP  180
SIHDITTVNL TNTTPADSNK PPSPDQSNTL LSQNPIGMQE MLIDWSQSKH GSIMVFDATL  240
GNLFVSSPSD IASNGLKLQE QNRYAGAHIN PHNLVFQRHQ IHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.11e-88MYB family protein