PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648305.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 295aa MW: 33715.6 Da PI: 6.5041

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W++++ g+ R +k+c++rw +yl XP_021648305.1 15 KGLWSPEEDQRLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP
2	Myb_DNA-binding	45.8	1.4e-14	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ +E+e ++ ++++lG++ W+ a++++ gRt++++k++w+++l XP_021648305.1 68 RGMFSLQEEETILTLHRLLGNK-WSQMAQHLP-GRTDNEIKNYWHSHL 113 7889****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MVCRSSDKSK PKHRKGLWSP EEDQRLRNYV LKHGHGCWSS VPINAGLQRN GKSCRLRWIN 60 YLRPGLKRGM FSLQEEETIL TLHRLLGNKW SQMAQHLPGR TDNEIKNYWH SHLKKKVLKA 120 DQGTLEEPNV HNTSSDNLES NNSPENLTMQ TPNYGSLLMN MEKSPTNTDQ SVPQLSDHSP 180 KQTNRSCLPK LMFAEWLSLD SFSSLSDPIM ASKGFLDQNN SNFQDNFMQG CFSNEGTFCN 240 GEFHNSLSDA SAEDMFSSQF KFECQSSVND QFVDFSSGED ICSEFTVNND LMYIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52260.1	3e-63	MYB family protein