PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648606.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 259aa MW: 28082.3 Da PI: 5.6959

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.8	1.2e-15	24	84	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ XP_021648606.1 24 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 84 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.4	8.7e-35	23	86	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_021648606.1 23 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 86 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MEDNQGQDPN RPGNHGTERS EPVRSRWTPK PEQILILESI FNSGMVNPPK DETVRIRKLL 60 EKFGSVGDAN VFYWFQNRRS RSRRRQRQMQ ATLAEEQRNQ QAQASGGAIQ YEGVSGGGGS 120 TSSLLGFANS PSFAVSPSYL VGSSSSSGVV GHEVGVVESL FSIPNQMGFQ EVEQGSGISS 180 ILCPSETSNL QYQTGFITVF INGVATEVPR GPLDMKAMFG QDAVLVHSSG VPVPCNESGF 240 LMQSLQHGES YFMVNIIGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	9e-36	WOX family protein