PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021648646.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 819aa    MW: 89804.6 Da    PI: 6.4219
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021648646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.76.2e-21119174156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t++q++eLe +F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k
  XP_021648646.1 119 KKKYHRHTPHQIQELEIFFKECPHPDEKQRMELSRRLGLESKQIKFWFQNRRTQMK 174
                     79999************************************************999 PP
2START185.52.8e-583255491206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++el+k a+ ++p+W ks     + +n++e+++ f++  +     + +ea r++g v   +  lve+l+d++ +W e ++    +a+t+
  XP_021648646.1 325 ELALAAMDELIKIAQIDSPLWIKSLdggkDALNYEEYMRMFSPCIGvkpssFVTEATRETGTVVISSLALVETLMDVN-RWVEAFPgliaRASTV 418
                     5899**************************************99889***99*********99999999*********.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      galq+m ae+q+ sp vp R + f+R+++q+ +g+w++vd+S+d +q   +s+++v +++lpSg++i++++ng skvtwveh 
  XP_021648646.1 419 DVISSGmagtknGALQVMHAEFQVVSPFVPvRQVRFLRFCKQHAEGVWAVVDISIDANQGSLNSQPFVVCRRLPSGCIIQDMPNGCSKVTWVEHS 513
                     ************************************************************988******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++++ +h+l++s+++sg+ +ga++wvatl+r+ce+
  XP_021648646.1 514 EYDESAVHQLYHSVLSSGRGFGAQRWVATLKRYCEC 549
                     **********************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 819 aa     Download sequence    
MSFQGLMISC CSSSVNSGGG GGSKIVADIV TRSNTMHSGG IAHQPPVLTP SIPKSPALFL  60
SLKGKMDSHG DMGLLGEHFD PSVMGRIKED GYESRSGSDN LEGASGDDQE AGEDQRARKK  120
KYHRHTPHQI QELEIFFKEC PHPDEKQRME LSRRLGLESK QIKFWFQNRR TQMKTQLERH  180
ENIILRQEND KLRAENELLK QNMADPICNS CGGPVVPGPV SYEQQQLRIE NARLKDELGR  240
VCALANKFLG RPLSSSASPI PPFGSNSKLD LSVGINGYDY EGLGNIETTL PIGLDYNDGI  300
TIPLMKPMTS PMVNEVPYDR SMFIELALAA MDELIKIAQI DSPLWIKSLD GGKDALNYEE  360
YMRMFSPCIG VKPSSFVTEA TRETGTVVIS SLALVETLMD VNRWVEAFPG LIARASTVDV  420
ISSGMAGTKN GALQVMHAEF QVVSPFVPVR QVRFLRFCKQ HAEGVWAVVD ISIDANQGSL  480
NSQPFVVCRR LPSGCIIQDM PNGCSKVTWV EHSEYDESAV HQLYHSVLSS GRGFGAQRWV  540
ATLKRYCECV MILTSPTISG DDQTVINISG KKSMVKLAQR MVDNFCSGVC ASSLRKWDKL  600
LVGNVGEDMR ILTRKNINDP GEPPGIVLSA ATSVWLPVMR QRLFDFLRDE QLRSEWDILS  660
HGGMMQEMVH ISKGHSGGNC VSLLRSSAVS PNANENSMLI LQETWNDASS SLVVYAPVDI  720
PSMSVVMNGG DSTYVALLPS GFVIHPYDSI GQGGPNFCKG TLVKRNGDGG DGEGSLLTVG  780
FQILVNNLPT AKLTVESVET VNNLISCTIQ RIKTVLQLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein