PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649066.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 144aa MW: 16267.5 Da PI: 9.3206

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.3	4.8e-42	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C++dC++apyfp+++p++fa+vhk++Gasnv k+l++lp+++r +a++sl+yeA++r++dPvyG+vg+i+ l qq+++++++la XP_021649066.1 5 RCAACKYLRRRCPSDCIFAPYFPSNNPQRFACVHKIYGASNVGKMLQQLPTHKRVQAANSLYYEAQCRIQDPVYGCVGIISLLLQQIHKAENQLA 99 6********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_021649066.1 100 KTQAE 104 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MNSERCAACK YLRRRCPSDC IFAPYFPSNN PQRFACVHKI YGASNVGKML QQLPTHKRVQ 60 AANSLYYEAQ CRIQDPVYGC VGIISLLLQQ IHKAENQLAK TQAEIAVLSN SHTQDSQFQQ 120 NFLLQQGNVG QSSRPSTQPS SWFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	2e-59	LBD family protein