PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649082.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 219aa MW: 25351.4 Da PI: 10.3285

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.7	3.6e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaevav+ifs++g+l+e+ss XP_021649082.1 9 KRIENAASRQVTFSKRRNGLLKKAYELSVLCDAEVAVLIFSQRGRLFEFSS 59 79***********************************************96 PP
2	K-box	58.4	3.2e-20	83	171	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++ ++ e++ + k+ie+L+ +q ++lG++L+s+s++eLq++ +qLek+l++i+++K el++e+ie+l+ +e+ l een +Lr k XP_021649082.1 83 DTAQRIQQQISESTEMVKKIEQLKISQGKFLGQGLTSCSVEELQEIHNQLEKGLSNIKERKAELFKEKIEQLKAQERLLLEENASLRVK 171 455566777789999***********************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MVRGKIQMKR IENAASRQVT FSKRRNGLLK KAYELSVLCD AEVAVLIFSQ RGRLFEFSSN 60 DMEKTIERYR RNAKDKVQAD SVDTAQRIQQ QISESTEMVK KIEQLKISQG KFLGQGLTSC 120 SVEELQEIHN QLEKGLSNIK ERKAELFKEK IEQLKAQERL LLEENASLRV KALLFGKESF 180 IYPPSKCPIG YSLLILIWHH DVYSVVRSHG RIQLNRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	3e-71	MIKC_MADS family protein