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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_021649191.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 304aa MW: 34359.4 Da PI: 8.4895 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.5 | 0.00022 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + F++ L H+++H
XP_021649191.1 55 YSCSFCRREFRSAQALGGHMNVH 77
99*******************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 304 aa Download sequence |
MEQARCWMWT KRKHSLSSHV QASTRPSYDE SWEEQAFAED AAGSLGGCIW PPRSYSCSFC 60 RREFRSAQAL GGHMNVHRRD RARLKQSPGP HNEVLHHDHQ NHHNLFQNPY SSLGFQYPSQ 120 ICTLVYSPNP NTDPGIVASP SSPCKLSTTP TQGNSDEKNF FPPFSPSTLK EEPDKKTPRS 180 SPPSWPNSPT DRCYHISDPR KEGKKNSRIV ESGCKAKVDY VKTDLSVSFN LVVRRTCPTI 240 SSDGDEEETI GCKRRRTRPS SLPFLVKSNS VDKHHVQSEV IEISPCSIEE LDLELRLGDR 300 PKVK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G37740.1 | 5e-29 | C2H2 family protein | ||||




