PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649394.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 351aa MW: 38686.7 Da PI: 10.2074

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.6	1e-15	51	134	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L+ea+++++ +r+klk+++We+v++++ ++ +++spk qCk+k+e+++kry+ + +++ s++p++ +l+ XP_021649394.1 51 EWSEGAVSSLLEAYESKWILRNRAKLKGHDWEDVARFVsSRANYTKSPKtqtQCKNKIESMKKRYRSESATADA------SSWPLYPRLD 134 5***********************************855666666543339*************999986......4699999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDKETNQESP SLPSNNNSIK EETSRKQLSA TGSGGFAAAA AAGGDRLKRD EWSEGAVSSL 60 LEAYESKWIL RNRAKLKGHD WEDVARFVSS RANYTKSPKT QTQCKNKIES MKKRYRSESA 120 TADASSWPLY PRLDLLLRGS AAATAAVAPQ PPPPPQSQQQ QPPPPTLQAS NHSPPLMLLE 180 TSHVLPQPPP QPLAPPPPPP PPAIGTAQNS HGSNGVDRGA KEDGVGTKLS DHVSDKNAME 240 TDSSTPALYS EKEKLRSKKL KMKMDRKKKR RREEWEIADS IRWLAEVVVR SEQARMDTMR 300 ELEKMRIEAE AKRGEMDLKR TEIIANTQLE IAKLFAGVGK GVDSSLRIGR S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDKETNQESP SLPSNNNSIK EETSRKQLSA TGSGGFAAAA AAGGDRLKRD EWSEGAVSSL  60
LEAYESKWIL RNRAKLKGHD WEDVARFVSS RANYTKSPKT QTQCKNKIES MKKRYRSESA  120
TADASSWPLY PRLDLLLRGS AAATAAVAPQ PPPPPQSQQQ QPPPPTLQAS NHSPPLMLLE  180
TSHVLPQPPP QPLAPPPPPP PPAIGTAQNS HGSNGVDRGA KEDGVGTKLS DHVSDKNAME  240
TDSSTPALYS EKEKLRSKKL KMKMDRKKKR RREEWEIADS IRWLAEVVVR SEQARMDTMR  300
ELEKMRIEAE AKRGEMDLKR TEIIANTQLE IAKLFAGVGK GVDSSLRIGR S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	272	RKKKRRR
2	266	273	RKKKRRRE
3	267	272	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	8e-97	Trihelix family protein