PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649438.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SRS

Protein Properties

Length: 282aa MW: 30833.8 Da PI: 8.8234

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	188.6	2.3e-58	80	239	5	154
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaeskk 98 + C CGn+akk+C+++RCRtCCksrg+dCath+kstWvpaa+rrerq ++ + + ++ s+ + +kr+re+ ++k+++ st+ ++a ++ XP_021649438.1 80 SRVCGGCGNRAKKECEYRRCRTCCKSRGYDCATHIKSTWVPAARRRERQGTEGSGAGGSSGSSsGGSGNKRPRENVTTKSNSF-STSHNNAAASF 173 568********************************************9998877665554437777888888733333333.33333333344 PP DUF702 99 eletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ s lP++v+++ vfrc+rv++++ ge+e+aYq+ v+i+GhvfkG+LydqG++e XP_021649438.1 174 SFDNGSnyqdasfkqsLPSQVRAPGVFRCIRVTAISGGEAEVAYQAIVNISGHVFKGFLYDQGIDE 239 4444335666666678*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MLGLHNVFLT APPPYSSSFQ QQPISSSHQI NSTIHDQCNI SNNQDSWTTF KRYHQQESSF 60 AKGHAFNVGE DNENTPDTSS RVCGGCGNRA KKECEYRRCR TCCKSRGYDC ATHIKSTWVP 120 AARRRERQGT EGSGAGGSSG SSSGGSGNKR PRENVTTKSN SFSTSHNNAA ASFSFDNGSN 180 YQDASFKQSL PSQVRAPGVF RCIRVTAISG GEAEVAYQAI VNISGHVFKG FLYDQGIDEK 240 NLFPCISKIP PVRRNRDSTS PIVDPPYAYP ASASYRFLEG NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	9e-52	SRS family protein