PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649570.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 232aa    MW: 25747.3 Da    PI: 7.0336
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF633.3e-204187349
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    i+    rqv+fskRr gi+KKA+EL++LC +e a+++fs+ gk + +
  XP_021649570.1 41 IQGGNARQVSFSKRRSGIFKKASELCTLCTVETALVVFSPGGKAFSF 87
                    555678************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MKYMEGFGGD QSRDGVYGFE SYCFIAGVVS MGRKKTQMKM IQGGNARQVS FSKRRSGIFK  60
KASELCTLCT VETALVVFSP GGKAFSFGHP CFEAIMKRLA DAEPRNRDPD FAQHMAEHEA  120
TLSELNKQYS DALKELEAEK KRGKELKQMR EAQGMPLLDK PIEELNLDEL ETLKAFLEQV  180
KGNLLKRLAE LSVQTSNLSA SSENSAEAID LRVTNPKGVG ANTHDHGISY EN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-36M-type_MADS family protein