PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649629.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 290aa MW: 32572.1 Da PI: 6.3852

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	111	130	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C C+k+F+r n++ H+ XP_021649629.1 111 FSCAVCNKTFNRYNNMQMHM 130 89*****************9 PP
2	zf-C2H2	13.3	0.00025	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_021649629.1 196 FGCRKCGKAFAVRGDWRTHEKNC 218 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQTPSFTNIS SSESVCIEAD DQEVDEDSLF LSLGPPGQNI TKHYPNYRPS LKNKQKVEEN 60 PTTESGVTVA LHIGPPNTGA SDSNPNHIGS LVEGQYWIPS PAQILVGPTQ FSCAVCNKTF 120 NRYNNMQMHM WGHGSQYRKG PESLRGTKQA SSMLRLPCYC CAEGCKNNID HPRSRPLKDF 180 RTLQTHYKRK HGAKPFGCRK CGKAFAVRGD WRTHEKNCGK LWFCICGSDF KHKRSLKDHV 240 RAFGDGHAPH TVEICEVEEE EEQDEEEEEE EEDDNKDQGD NGGGHGPVFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-124	C2H2 family protein