PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021649833.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GATA
Protein Properties Length: 374aa    MW: 41311.5 Da    PI: 4.3345
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021649833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.61.1e-15209245135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_021649833.1 209 CQHCGISEkdTPAMRRGPAGPRTLCNACGLMWANKGT 245
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MEKLNRIPLR ERPCDGEEDD RSMVQVDGGE LDGGFDGGEE EDGVMNGMEE VAQMSSMDFK  60
SNNGCMVQSS RTSELTIAFE GEVYVFPAVT PQKVQAVLLL LGGADTPASV PSSEFLLQQN  120
AGVYHSVGDA SRGSKLSRRI ASLVRFREKR KGRCFEKKIR YNCRKEVAER MHRKNGQFAS  180
LKDCYNTDAG SNWEPSNGTP HSESILCRCQ HCGISEKDTP AMRRGPAGPR TLCNACGLMW  240
ANKGTLRDLT KGGRHISFDQ NELGTPDFKP STMEQENPYP NQDEEGSPEE NKPAPLHSES  300
SLRPNDQELL ETDETLADPL PMQVENSSVN LDDEDFQGTL DELGNVSGSE FEIPGNFDDQ  360
VELDDSNTSE WPGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.14e-63GATA family protein