PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021649973.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 365aa MW: 40447.5 Da PI: 6.3819

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021649973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W+++++ g+ R++k+c++rw +yl XP_021649973.1 14 RGLWSPEEDEKLINYISTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+v+++ lG++ W+ Ia++++ gRt++++k++w+ XP_021649973.1 67 RGSFSPQEAALIVELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKRLISHD 120 VPALASFTDF HNPNGSEEAF FSLTGNPNLI LTAQQDQLYL PSPASMLQSF GQGDFKFNQP 180 NNYNLDLAHF APPIIPPPPL NNCSPSFDPM WALPYLPQHL DPNHQEDQIL SNGAGPHYIG 240 DKLNQDQTNA MMPNHENQAM VPMMPKLCEI IEGSSVCCNI PSSSSTLQEV QIDPVARLPS 300 FPTGSYPHEP HVPANIQMEF IDAIMSALPS SSSSSTLSAF SSDKFGANPN NNDNNNLPSS 360 CSWDA

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKRLISHD  120
VPALASFTDF HNPNGSEEAF FSLTGNPNLI LTAQQDQLYL PSPASMLQSF GQGDFKFNQP  180
NNYNLDLAHF APPIIPPPPL NNCSPSFDPM WALPYLPQHL DPNHQEDQIL SNGAGPHYIG  240
DKLNQDQTNA MMPNHENQAM VPMMPKLCEI IEGSSVCCNI PSSSSTLQEV QIDPVARLPS  300
FPTGSYPHEP HVPANIQMEF IDAIMSALPS SSSSSTLSAF SSDKFGANPN NNDNNNLPSS  360
CSWDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	9e-83	MYB family protein