PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650098.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 215aa MW: 24852.1 Da PI: 7.7703

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.6e-18	94	148	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Le+ F+ + ++ +++ eLA++l+Lt rqV vWFqNrRa+ k XP_021650098.1 94 RKKLRLTKEQSTLLEDSFKLHTALNLAQKHELAERLSLTARQVEVWFQNRRARTK 148 78889************************************************98 PP
2	HD-ZIP_I/II	113.4	1.5e-36	94	182	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLE+sF+ ++ L+ +K+ela++L l++rqv+vWFqnrRARtk+kq+E d+e+Lkr++++l+een+rL+ke ++Lr+ XP_021650098.1 94 RKKLRLTKEQSTLLEDSFKLHTALNLAQKHELAERLSLTARQVEVWFQNRRARTKLKQTEADCEFLKRCCESLSEENTRLKKELQKLRS 182 69*************************************************************************************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MEDDHEDEHC NTGLGLKLGM THYVPKEQKR HNKDKSRVCL DLSFTLRPKD EEEEEEAISV 60 RSGSSFKSVH HQDDEDHATN KGNDFISINK NSSRKKLRLT KEQSTLLEDS FKLHTALNLA 120 QKHELAERLS LTARQVEVWF QNRRARTKLK QTEADCEFLK RCCESLSEEN TRLKKELQKL 180 RSLRLIERSP LCLHLPACPS CEKSTAFGCG PLHQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	99	SRKKLRL
2	143	151	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-47	HD-ZIP family protein