PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650424.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GATA
Protein Properties Length: 173aa    MW: 19701.6 Da    PI: 8.881
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-19107141135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C+t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_021650424.1 107 CSHCQTDKTPQWRMGPMGQKTLCNACGVRYKSGRL 141
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MADDMSDLPD LALDHYKKST QSQLCIPQDP LADLEWFPSF SDDFISLPDL FLTPEKETLH  60
CNRSPAGFQM TEEKTTLEKP EGSKTRVGFP NEKQSKGVVM MKKKRRCSHC QTDKTPQWRM  120
GPMGQKTLCN ACGVRYKSGR LVPEYRPAAS PTFNGLCHSN FHSKILRRKG INY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102106KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-34GATA family protein