PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650878.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 185aa    MW: 20776.6 Da    PI: 8.2128
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY198.33.2e-6171585170
           YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 
                       +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++              +  + ++  + +   s+s+ +++ 
  XP_021650878.1   7 VEPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDA-------------QAPNYSIPAYRIDLGSSSKCNNKI 88 
                     679********************************************99999998885.............222333333333333333333322 PP

           YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++      +v++   v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWah+P+ihfgl
  XP_021650878.1  89 SMR-APASNVSEDRVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIHFGL 158
                     222.2233444445689****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSSCIDVEPE QLCYIPCNFC NIVLAVSVPC SSLFDIVTVR CGHCTNLWSV NMAAAFQSLS  60
WQDAQAPNYS IPAYRIDLGS SSKCNNKISM RAPASNVSED RVVNRPPEKR QRVPSAYNQF  120
IKEEIQRIKA NNPDISHREA FSTAAKNWAH YPHIHFGLML ETNSQAKLND ASEKHLMSRA  180
APYNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.14e-93YABBY family protein