PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650879.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 132aa    MW: 14751.8 Da    PI: 7.9641
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1067.4e-3381226134
           YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                      +eq+Cy+ CnfCn +lavsvP +slf +vtvrCGhCt+l svn+a a q l+ ++    +       +    +  +++  +++ +++ s+++  
  XP_021650879.1   8 VPEQLCYIPCNFCNIVLAVSVPCSSLFDTVTVRCGHCTNLWSVNMAAAFQSLSWQDV---Q-----GPNYTLPDYRIDMGSSSKGNNKISMRA-- 92 
                     689********************************************9999999885...2.....222233333333333333333332222.. PP

           YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfik 134
                            +v++   v+rPPekrqr+Psayn+fik
  XP_021650879.1  93 ----PASNVSEDRVVNRPPEKRQRIPSAYNQFIK 122
                     ....222333334589*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MSSCIGVVPE QLCYIPCNFC NIVLAVSVPC SSLFDTVTVR CGHCTNLWSV NMAAAFQSLS  60
WQDVQGPNYT LPDYRIDMGS SSKGNNKISM RAPASNVSED RVVNRPPEKR QRIPSAYNQF  120
IKYCNPQSLE FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-56YABBY family protein