PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021650888.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 94aa    MW: 11046.1 Da    PI: 10.9509
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021650888.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF755.7e-24858151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ++ien  +rqvtfskRrn ++KKA+E+S+LCd++va i fs++g++  +ss
  XP_021650888.1  8 EKIENPLRRQVTFSKRRNSLIKKANEISILCDVDVAFIAFSPSGRIIKFSS 58
                    57********************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MGKKIAMEKI ENPLRRQVTF SKRRNSLIKK ANEISILCDV DVAFIAFSPS GRIIKFSSRP  60
RFEDMIECYI KLPAVKRHER NPQMKNIERL QINL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-23MIKC_MADS family protein