PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021651086.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 541aa    MW: 60318 Da    PI: 5.9818
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021651086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.86.8e-1301715401373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+++++ +   +l+++ +  +s +g+p+qRl ay++e+L ar  +s++++y+al+++e +   s++ l+++++++e++P+lkf++
  XP_021651086.1 171 LKQLLIACAKALAENNVNDFGKLIEKARGAVSISGEPIQRLGAYLVEGLVARKESSGNNIYRALRCREPE---SKDLLSYMQILYEICPYLKFGY 262
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea ++e+r+HiiDf+i qG+QW++LlqaLa++p+g+p++RiTg+++p ++  + + le++++rLa + e++++p+ef+  v     +
  XP_021651086.1 263 MAANGAIAEACKNEDRIHIIDFQIAQGTQWITLLQALAAKPDGAPHVRITGIDDPVNKqaRGDGLEAVHRRLAIISEKFNIPIEFHG-VPVFAPE 356
                     *******************************************************99988999************************.6888999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+v+pgEalaVn+ lqlh+++de v+++++rd +L++vksl+Pkvv++veqe+++n+++Fl+rf+e+l+yy a+f+s++++lpr+++eri
  XP_021651086.1 357 VTRDMLDVRPGEALAVNFPLQLHHTPDEGVDVSNPRDGLLQMVKSLNPKVVTLVEQESNTNTTPFLTRFIETLDYYLAMFESIDVTLPRDQKERI 451
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      vE+++l+++ivnv+aceg+er+erhe ++kW+ rl++aGF+++pls+++++ +++llr ++ + y++ e++g+++lgWk+r+Lvs+SaW
  XP_021651086.1 452 GVEQHCLAKDIVNVIACEGKERVERHELFGKWKCRLTMAGFRQYPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWKNRNLVSASAW 540
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MESHQFFRYG VTGNSPSSPF SNQFDCDTIT TLSDSQEQYS STDNLSEASP SCNSSREPGS  60
YFHRQSPPLS RDANSSQNIK YTLLQLETAL MAPDDDEDMS IADTSLGESS RPQTSGQRTG  120
AWSQEHHVSC MIPAHTSIDS RHRQSGEGAA VEKHQKPLEE AKFQSIPPGS LKQLLIACAK  180
ALAENNVNDF GKLIEKARGA VSISGEPIQR LGAYLVEGLV ARKESSGNNI YRALRCREPE  240
SKDLLSYMQI LYEICPYLKF GYMAANGAIA EACKNEDRIH IIDFQIAQGT QWITLLQALA  300
AKPDGAPHVR ITGIDDPVNK QARGDGLEAV HRRLAIISEK FNIPIEFHGV PVFAPEVTRD  360
MLDVRPGEAL AVNFPLQLHH TPDEGVDVSN PRDGLLQMVK SLNPKVVTLV EQESNTNTTP  420
FLTRFIETLD YYLAMFESID VTLPRDQKER IGVEQHCLAK DIVNVIACEG KERVERHELF  480
GKWKCRLTMA GFRQYPLSSY VNSVIRSLLR CYSEHYTLVE KDGAMLLGWK NRNLVSASAW  540
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-174GRAS family protein