PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651109.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 575aa MW: 65279 Da PI: 8.648

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.4e-12	407	451	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN+ fe Lr+llP++ K +Ka++L+++ eY+ sL XP_021651109.1 407 HMISERRRREKINETFEALRKLLPPD-----AKKDKASVLTRTREYLTSL 451 8899*******************7.....699**********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYWPQLNH RLYFLDGDYH EQTNQSGSSS 60 GSLARWLFDK YRAEAFFIVN DRVPGMAFGN KQPYRELNES ELQRMASVSV QKQFYQEARI 120 KTAVFMGCRS GEIEIGWSNG MTQINMENAM RSLFSEVVIP QKQSSPRELS HVIDPNWPSS 180 SSSSLRSLSM DSPDSSPFLF NVPTTSHIPE VPQETPSLQQ ISSTSSAIQQ VLQSLQPVQS 240 TSRPLQLAMQ SLQPVPSTTS PLQLAMQSLQ PVPSTTSPLQ PAMQSLHPIP STTNPHQVAV 300 QTFSLTRNVQ LPSQESEDDA IIRAILAVLT SPSTSTNSSI MPNSPYHYRE SQKASAFKDY 360 IAPTRQTRQN LHRQSMLKQA ITYYRSLNIL RPEHMPASRP TNTQLHHMIS ERRRREKINE 420 TFEALRKLLP PDAKKDKASV LTRTREYLTS LNAQVEELRK RNQQLEAQVQ QLPTKEVAEE 480 GSESSNERIE LRVVHVSEST SEEQRIIDLQ VVLRGVKCSI QEMLIRILEF LNQVNNVNVM 540 SIEANARTTE SRSMNRVVLR LKIEVCLLLY ILSSG

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MDTVFSIPSQ ADRATYLRSL MQSFGCNYIC LWFYWPQLNH RLYFLDGDYH EQTNQSGSSS  60
GSLARWLFDK YRAEAFFIVN DRVPGMAFGN KQPYRELNES ELQRMASVSV QKQFYQEARI  120
KTAVFMGCRS GEIEIGWSNG MTQINMENAM RSLFSEVVIP QKQSSPRELS HVIDPNWPSS  180
SSSSLRSLSM DSPDSSPFLF NVPTTSHIPE VPQETPSLQQ ISSTSSAIQQ VLQSLQPVQS  240
TSRPLQLAMQ SLQPVPSTTS PLQLAMQSLQ PVPSTTSPLQ PAMQSLHPIP STTNPHQVAV  300
QTFSLTRNVQ LPSQESEDDA IIRAILAVLT SPSTSTNSSI MPNSPYHYRE SQKASAFKDY  360
IAPTRQTRQN LHRQSMLKQA ITYYRSLNIL RPEHMPASRP TNTQLHHMIS ERRRREKINE  420
TFEALRKLLP PDAKKDKASV LTRTREYLTS LNAQVEELRK RNQQLEAQVQ QLPTKEVAEE  480
GSESSNERIE LRVVHVSEST SEEQRIIDLQ VVLRGVKCSI QEMLIRILEF LNQVNNVNVM  540
SIEANARTTE SRSMNRVVLR LKIEVCLLLY ILSSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	411	416	ERRRRE
2	412	417	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-46	bHLH family protein