PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651236.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 216aa MW: 24655.9 Da PI: 9.8385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G ++W++ ++ g+ R++k+c++rw +yl XP_021651236.1 14 KGPWTPEEDHILVSYIQRFGHNNWRALPKQAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	56.7	5.4e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e ++++++ lG++ W++Ia++++ gRt++++k++w+++ XP_021651236.1 67 RGNFSSEEEETIIKVHQILGNR-WSAIAAKLP-GRTDNEVKNYWHTH 111 89******************.*****.*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MLRVPCCEKM GLKKGPWTPE EDHILVSYIQ RFGHNNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPGIKRGNF SSEEEETIIK VHQILGNRWS AIAAKLPGRT DNEVKNYWHT HIKKRVEEKQ 120 ANPSTSSSAG NCTKTSKRAV INNAISSQQP ENFPTHQRNH YLGHAPVFPQ EQSQEPLATV 180 EAINGFNTIN VNDNESWYDL FMKVANSREV HGNLGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-75	MYB family protein