PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021651497.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 171aa    MW: 19731.8 Da    PI: 9.3659
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021651497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF62.25.7e-20957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ie +  r++ fskR+ng+  KA+ELS+LCd+e+a++ fs+ gkl+ y
  XP_021651497.1  9 KKIEKSGYRNIAFSKRKNGLVNKAYELSTLCDIEIALVTFSPAGKLFIY 57
                    6899999***************************************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGRAKIELKK IEKSGYRNIA FSKRKNGLVN KAYELSTLCD IEIALVTFSP AGKLFIYDAK  60
KRWEQVLKQY FDLPAPKLGR LRNQELVGRF IDQLILEAND YHQREQIHQS IGLLGLQVLQ  120
SEVRKCTSEL EKVEKEISNF LGIPSSLDTR SEAEHEQMLE ETLLKVQIRK A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.25e-28MIKC_MADS family protein