PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651709.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 391aa MW: 44596.6 Da PI: 7.2716

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.8	3.5e-15	73	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_021651709.1 73 SRFRGVSRHRWTGRFEAHLWDkLSWNVtqkKKgKQVYLGAYDEEESAARAYDLAALKYWG 132 789****************888855555447***********************98 PP
2	AP2	52.4	1.3e-16	175	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_021651709.1 175 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 226 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MKQNMEMIMM KNEENLGRRR MCMAEGETKA THVKRRRRDS AAVALGVDEN HSQQLPQQQT 60 DQTSASTTVK RSSRFRGVSR HRWTGRFEAH LWDKLSWNVT QKKKGKQVYL GAYDEEESAA 120 RAYDLAALKY WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRKSSGF SRGVSKYRGV 180 ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSTYIR 240 WLKPGVAVQV AANETETVID PQTLPSTNSY IAREESKPSF LSTTQFSSDY LDSPQKQEVF 300 QNNIPVSPCN KASSPSALSL LLRSSIFKEL VEKNSNVSED DNDGEETKNQ PQIGSDDEFG 360 GIFYEGIGDI PFAYSNKESL DLQERELHFV F

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MKQNMEMIMM KNEENLGRRR MCMAEGETKA THVKRRRRDS AAVALGVDEN HSQQLPQQQT  60
DQTSASTTVK RSSRFRGVSR HRWTGRFEAH LWDKLSWNVT QKKKGKQVYL GAYDEEESAA  120
RAYDLAALKY WGTSTFTNFP ISDYEKEIEI MQTVTKEEYL ASLRRKSSGF SRGVSKYRGV  180
ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSTYIR  240
WLKPGVAVQV AANETETVID PQTLPSTNSY IAREESKPSF LSTTQFSSDY LDSPQKQEVF  300
QNNIPVSPCN KASSPSALSL LLRSSIFKEL VEKNSNVSED DNDGEETKNQ PQIGSDDEFG  360
GIFYEGIGDI PFAYSNKESL DLQERELHFV F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	18	38	RRRMCMAEGETKATHVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	2e-93	AP2 family protein