PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651876.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 479aa MW: 54304.6 Da PI: 7.1483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.2e-14	24	68	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + ++G+++W+ Ia+++ +t qc+ rw++yl XP_021651876.1 24 TWTQQEDDILRQQISLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 68 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_021651876.1 74 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MQEPKTKSNG GNEDSKKKER HIVTWTQQED DILRQQISLH GTENWAIIAS KFKDKTTRQC 60 RRRWYTYLNS DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK 120 KRAKYEALAK ENKNASINSN NKRILFHNGF NADGTPENAA PAKKTRRSHI PVHSEHRKLA 180 DRSHLQCGNQ QSRPPFSVLA QNLHNVNVTG QHHAINTKEV SIDASQNSKI QGTYLRKDDP 240 KITVLMQQAE LLSSLALKIN TENTDQSLEN AWKVLQDFLN QKENDILRYR FTDIDFQLED 300 FKDFIEDLRS SNDGSRPSWR QPDLYEESPA SSEYSTGSTL MPCTAPDKTE QTQVEIGALH 360 EDFPIELQSV HVKEQRDVDE CEKESISCAN ITQGVIFPSF DQQAHDDTVV SASSSTEFSS 420 PIQVTPLFRS LAAGIPSPKF SESERNFLLK TLGVESPCPN PSINPSQPPL CRRALLQSL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MQEPKTKSNG GNEDSKKKER HIVTWTQQED DILRQQISLH GTENWAIIAS KFKDKTTRQC  60
RRRWYTYLNS DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK  120
KRAKYEALAK ENKNASINSN NKRILFHNGF NADGTPENAA PAKKTRRSHI PVHSEHRKLA  180
DRSHLQCGNQ QSRPPFSVLA QNLHNVNVTG QHHAINTKEV SIDASQNSKI QGTYLRKDDP  240
KITVLMQQAE LLSSLALKIN TENTDQSLEN AWKVLQDFLN QKENDILRYR FTDIDFQLED  300
FKDFIEDLRS SNDGSRPSWR QPDLYEESPA SSEYSTGSTL MPCTAPDKTE QTQVEIGALH  360
EDFPIELQSV HVKEQRDVDE CEKESISCAN ITQGVIFPSF DQQAHDDTVV SASSSTEFSS  420
PIQVTPLFRS LAAGIPSPKF SESERNFLLK TLGVESPCPN PSINPSQPPL CRRALLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein