PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652128.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 500aa MW: 55331.4 Da PI: 7.3458

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	57.1	3.3e-18	263	312	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f++Lrel+P+ ++K +Ka+ L +++eYI+ Lq XP_021652128.1 263 RSKHSATEQRRRSKINDRFQRLRELIPHG----DQKRDKASFLLEVIEYIQFLQ 312 889***********************7....7*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MELPQQHRLF ETEGRKATHD FLSLHSHSAV QQDPRPPSQG YLKTHDFLQP LERVGKNAAK 60 EETTGEISSL EKPPPPAPPP SVEHTLPGGI GTYTISHISN YFNQRISKPE GSAIFTVAQA 120 SSAEKNEDDS NCSSYTGSGF TLWEESALKK GKTRKENEGE RSNIVREAAV KAGHWTSSER 180 PSQSSTNAHL NSFSSLSSSQ PSGQKGHSFI EMIKSAKDSA QDDNLDDEEE FVLKKESPSP 240 IHKGELRVKV DGKSTDHKAN TPRSKHSATE QRRRSKINDR FQRLRELIPH GDQKRDKASF 300 LLEVIEYIQF LQEKVQKYEG SYQGWNHAPA KLVPLLTVLW LNQRNGNRPS ESYVDQSRGM 360 NSGAGPAFLF AAKVDEKNIA LSPTIPRSTR NPVESDIKSD TAFKLLDHHP EITNKAMPFP 420 TSLQPNFFSS CRTGGAVAQV PPRMVSDAEN MTSQPQSQSH QIRSCANDGA VAIDKLKEQE 480 LSIEGGAINI SSLYSQGVLE

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MELPQQHRLF ETEGRKATHD FLSLHSHSAV QQDPRPPSQG YLKTHDFLQP LERVGKNAAK  60
EETTGEISSL EKPPPPAPPP SVEHTLPGGI GTYTISHISN YFNQRISKPE GSAIFTVAQA  120
SSAEKNEDDS NCSSYTGSGF TLWEESALKK GKTRKENEGE RSNIVREAAV KAGHWTSSER  180
PSQSSTNAHL NSFSSLSSSQ PSGQKGHSFI EMIKSAKDSA QDDNLDDEEE FVLKKESPSP  240
IHKGELRVKV DGKSTDHKAN TPRSKHSATE QRRRSKINDR FQRLRELIPH GDQKRDKASF  300
LLEVIEYIQF LQEKVQKYEG SYQGWNHAPA KLVPLLTVLW LNQRNGNRPS ESYVDQSRGM  360
NSGAGPAFLF AAKVDEKNIA LSPTIPRSTR NPVESDIKSD TAFKLLDHHP EITNKAMPFP  420
TSLQPNFFSS CRTGGAVAQV PPRMVSDAEN MTSQPQSQSH QIRSCANDGA VAIDKLKEQE  480
LSIEGGAINI SSLYSQGVLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-109	bHLH family protein