PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652358.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 233aa    MW: 25467.1 Da    PI: 10.5405
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652358.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind244.28.8e-7536233103301
       GAGA_bind 103 sgtksidslqqlse....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekk 192
                     ++t+si+s  ++ +      +++ +  ++ +e  ++++  +++ +a+++k + k++++ + k+ k k++kk+s+k++ +      + +++ +ek+
  XP_021652358.1  36 PKTSSIHSQGTQIDsqpgLPVAPICSVAPTTEPAKNNNSGTKPAKARKQKPSLKGSNQISSKTLKPKQPKKTSSKKNGH------SmPEAIREKR 124
                     4555555444332212223344444445555555555555666666666666666666666666666666633333222......2245678999 PP

       GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
                     ++++ ++ +++D s++P P CsCtG++r+CYkWG+GGWqS+CCt++iS yPLP+s++r+gaR+agrKmS+ga+ klL kLaaeG+dls+pvDLk+
  XP_021652358.1 125 NLNVDIDRMNYDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTISISEYPLPMSSTRPGARMAGRKMSNGAYVKLLLKLAAEGHDLSHPVDLKE 219
                     *********************************************************************************************** PP

       GAGA_bind 288 hWAkHGtnkfvtir 301
                     hWA+HGtnkfv i+
  XP_021652358.1 220 HWARHGTNKFVIIK 233
                     ***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MMGTYSNRSH ITPETSTGAS VPHFSWFYSR SFYSAPKTSS IHSQGTQIDS QPGLPVAPIC  60
SVAPTTEPAK NNNSGTKPAK ARKQKPSLKG SNQISSKTLK PKQPKKTSSK KNGHSMPEAI  120
REKRNLNVDI DRMNYDLSGV PSPFCSCTGM PRVCYKWGAG GWQSSCCTIS ISEYPLPMSS  180
TRPGARMAGR KMSNGAYVKL LLKLAAEGHD LSHPVDLKEH WARHGTNKFV IIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.32e-69BBR-BPC family protein