PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652388.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 762aa    MW: 83141.1 Da    PI: 6.0987
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-2091146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_021652388.1  91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
                     688999***********************************************999 PP
2START221.23.3e-692805001206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+ +ep+W +s       +n+de++++f+++ +     ++ ea+r+++vv+m++ +lve l+d++ qW++ +     +a+tl
  XP_021652388.1 280 ELAVAAMEELIRMAQMGEPLWISSLdgtnAVLNEDEYIRIFPRGIGpkpsgFKCEASRETAVVIMNHINLVEYLMDVN-QWSTVFSgivsRAMTL 373
                     57899********************9998899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q+++plvp R++++vRy++q+ +g+w++vdvS+d+ ++ p     +R++++pSg+li++++ng+skvtwveh+
  XP_021652388.1 374 EVLSTGvagnynGALQVMTAEFQLPTPLVPtRESYYVRYCKQHAEGTWAVVDVSLDNLRPSPA----ARCRRRPSGCLIQEMPNGYSKVTWVEHI 464
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_021652388.1 465 EVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCER 500
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MPAGVMIPAR NMPSVIGTNG SVGGFGSSSG LTLGQPNMID GQLHHLDMTQ NTSESDLARI  60
RDEEFDSTNT KSGSDNHEGA SGDDQDQRPK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR  120
KELSRELGLE PLQVKFWFQN KRTQMKTQHE RHENTQLRAE NEKLRADNMR YREALSNASC  180
PNCGGPTAIG EMSFDEHHLR LENARLREEI DRISAIAAKY VGKPVVNYPL LSAPMPPRPL  240
ELGVGNFGPQ PGIGGEMYGA GDLLRSIGAH SEADKPMIIE LAVAAMEELI RMAQMGEPLW  300
ISSLDGTNAV LNEDEYIRIF PRGIGPKPSG FKCEASRETA VVIMNHINLV EYLMDVNQWS  360
TVFSGIVSRA MTLEVLSTGV AGNYNGALQV MTAEFQLPTP LVPTRESYYV RYCKQHAEGT  420
WAVVDVSLDN LRPSPAARCR RRPSGCLIQE MPNGYSKVTW VEHIEVDDRG VHNLYKQLVS  480
SGHAFGAKRW VATLDRQCER LASAMATNIP TGDVGVITNQ EGRKSMLKLA ERMVISFFAG  540
VSASTAHTWT TLSGTGADDV RVMTRKSVDD PGRPPGIVLS AATSFWLPVP PKRVFDFLRD  600
ENSRSEWDIL SNGGVVQEMA HIANGRDTGN CVSLLRVNSA NSSQSNMLIL QESCTDPTAS  660
FVIYAPVDIV AMNVVLNGGD PDYVALLPSG FAILPDGTTT ITHGGGIGES VSAGGSLLTV  720
AFQILVDSVP TAKLSLGSVA TVNNLIACTV ERIKAALSCE NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein