PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652390.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 730aa    MW: 80216.8 Da    PI: 6.0069
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2059114156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_021652390.1  59 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
                     688999***********************************************999 PP
2START221.33e-692484681206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+ +ep+W +s       +n+de++++f+++ +     ++ ea+r+++vv+m++ +lve l+d++ qW++ +     +a+tl
  XP_021652390.1 248 ELAVAAMEELIRMAQMGEPLWISSLdgtnAVLNEDEYIRIFPRGIGpkpsgFKCEASRETAVVIMNHINLVEYLMDVN-QWSTVFSgivsRAMTL 341
                     57899********************9998899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q+++plvp R++++vRy++q+ +g+w++vdvS+d+ ++ p     +R++++pSg+li++++ng+skvtwveh+
  XP_021652390.1 342 EVLSTGvagnynGALQVMTAEFQLPTPLVPtRESYYVRYCKQHAEGTWAVVDVSLDNLRPSPA----ARCRRRPSGCLIQEMPNGYSKVTWVEHI 432
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_021652390.1 433 EVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCER 468
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    
MFQPNMIDGQ LHHLDMTQNT SESDLARIRD EEFDSTNTKS GSDNHEGASG DDQDQRPKKK  60
RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH  120
ENTQLRAENE KLRADNMRYR EALSNASCPN CGGPTAIGEM SFDEHHLRLE NARLREEIDR  180
ISAIAAKYVG KPVVNYPLLS APMPPRPLEL GVGNFGPQPG IGGEMYGAGD LLRSIGAHSE  240
ADKPMIIELA VAAMEELIRM AQMGEPLWIS SLDGTNAVLN EDEYIRIFPR GIGPKPSGFK  300
CEASRETAVV IMNHINLVEY LMDVNQWSTV FSGIVSRAMT LEVLSTGVAG NYNGALQVMT  360
AEFQLPTPLV PTRESYYVRY CKQHAEGTWA VVDVSLDNLR PSPAARCRRR PSGCLIQEMP  420
NGYSKVTWVE HIEVDDRGVH NLYKQLVSSG HAFGAKRWVA TLDRQCERLA SAMATNIPTG  480
DVGVITNQEG RKSMLKLAER MVISFFAGVS ASTAHTWTTL SGTGADDVRV MTRKSVDDPG  540
RPPGIVLSAA TSFWLPVPPK RVFDFLRDEN SRSEWDILSN GGVVQEMAHI ANGRDTGNCV  600
SLLRVNSANS SQSNMLILQE SCTDPTASFV IYAPVDIVAM NVVLNGGDPD YVALLPSGFA  660
ILPDGTTTIT HGGGIGESVS AGGSLLTVAF QILVDSVPTA KLSLGSVATV NNLIACTVER  720
IKAALSCENA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein