PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652563.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 116aa    MW: 13029.2 Da    PI: 8.3203
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.72e-3851041100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C+aCk+lrrkC+ dC+++pyfp+++p++f +vhk++G snv k+l++lp + r +a+++l+yeA++r++dPvyG+vg+i+ l qq+++++++la
  XP_021652563.1   5 RCSACKYLRRKCPLDCIFSPYFPSNDPERFSCVHKIYGSSNVGKMLQQLPVHLRAAAADCLCYEARCRIQDPVYGCVGIISLLYQQIHSAENQLA 99 
                     6********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++k+e
  XP_021652563.1 100 ETKAE 104
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MINGRCSACK YLRRKCPLDC IFSPYFPSND PERFSCVHKI YGSSNVGKML QQLPVHLRAA  60
AADCLCYEAR CRIQDPVYGC VGIISLLYQQ IHSAENQLAE TKAEIAVLAV NKNFQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.14e-54LBD family protein