PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652602.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 173aa    MW: 20040.7 Da    PI: 8.1843
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652602.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.91.9e-163884349
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    i++ +     fskRr+g++KKA E++ LC++e+avi fs+ gk y +
  XP_021652602.1 38 IQDRRSLILAFSKRRTGLFKKAGEVCNLCGVEAAVITFSPAGKPYAF 84
                    6666666679********************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MEITAADSDA PPEQSRRRGA REWRRGGRGR RRIEIKKIQD RRSLILAFSK RRTGLFKKAG  60
EVCNLCGVEA AVITFSPAGK PYAFGKPSAD SVVRRYLTES ISTASTSELY LPAEEEEEEE  120
EEEDVFWWQQ SIEDLDMKEL VQYKASLEGL RRNLIMRIEE MKMRRAATRN FFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-24M-type_MADS family protein