PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021652630.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 272aa    MW: 30448.6 Da    PI: 9.1708
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021652630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.9e-19127181256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_021652630.1 127 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTK 181
                     788899***********************************************98 PP
2HD-ZIP_I/II125.42.6e-40127216191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+++++L+p++K++lar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
  XP_021652630.1 127 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 216
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MGCHDDGCNT GLVLGLGFSA TTALEKPGNN NNQKPKMVNK PCFEPSLSLS LSGEIYRSSS  60
RKIIDAKKGC KDYVGADLFR QASPHSAVSS FSSGRVKRER DLSSEEIEAE RVSSRVSDED  120
EDATNTRKKL RLTKEQSALL EESFKQHSTL NPKQKQALAR QLNLRPRQVE VWFQNRRART  180
KLKQTEVDCE FLKKCCETLT DENRRLQKEL QELKALKLAQ PFYMHMPAAT LTMCPSCERI  240
GGVGDGASKN NPFSMAPKPH FYNPFTNPSA AC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126132TRKKLRL
2176184RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.13e-94HD-ZIP family protein