PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653156.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 691aa MW: 77191.7 Da PI: 5.3009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	480	526	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL +++Y+k+L+ XP_021653156.1 480 NHVLAERRRREKLNERFMILRSLVPFV-----TKMDKASILGDTIDYVKQLR 526 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MAAPPSSRLQ SMLQAAAQSV QWTYSLFWQI CPQQRILVWG DGYYNGAIKT RKTVQPMEVG 60 AVEASLQRSQ QLRDLYESLS AGETKQTARR PSAALSPEDL TESEWFYLMC VSFSFPPGTG 120 LPGKAYARLQ HVWLTGANES DSKTFSRAIL AKSAHIQTVV CIPLLDGVVE LGTTEKVQED 180 LGFVQRVKSI FTDHHHPISL PPKPALSEHS TSNTDTSSDQ RPHFQSPIPS IYGATDPPTN 240 DNQDDDDDDD EEEEDDDEEE EERSDSEGET GRNTRSVPTQ AETVTAEPSE LMQLEMSEDI 300 RLGSPDDGSN NMESDFQLIS SGKLTGHHQS RADSLRAESA GRWVIVQDPL CSSLEPVAAA 360 GNRPVGPHAL KEMAQEDTHY SQTVSGILQN QRIRWAESSS LPYLSYSNQS AFTKCTNRCS 420 DHLLHLPIEG PSQWFLKYIL FSVPYLHHKY LEENSPKPRD GDDANRFRKG GAALDELSAN 480 HVLAERRRRE KLNERFMILR SLVPFVTKMD KASILGDTID YVKQLRQKIQ ELEARNRQME 540 IEQRSRLVDP PQRTSSLKEQ RSAVPVMDRA RIVPGYGPTS DKKKLRIVDG SGGCTKPKTV 600 ETSPLVEAET SVEVSIIECD ALLEIQCGYR EGLLLDIMQM LREIRIEITA VQSSLNNGVL 660 MAELRAKVKD NVAGKKVSIV KVKRAIHQII P

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MAAPPSSRLQ SMLQAAAQSV QWTYSLFWQI CPQQRILVWG DGYYNGAIKT RKTVQPMEVG  60
AVEASLQRSQ QLRDLYESLS AGETKQTARR PSAALSPEDL TESEWFYLMC VSFSFPPGTG  120
LPGKAYARLQ HVWLTGANES DSKTFSRAIL AKSAHIQTVV CIPLLDGVVE LGTTEKVQED  180
LGFVQRVKSI FTDHHHPISL PPKPALSEHS TSNTDTSSDQ RPHFQSPIPS IYGATDPPTN  240
DNQDDDDDDD EEEEDDDEEE EERSDSEGET GRNTRSVPTQ AETVTAEPSE LMQLEMSEDI  300
RLGSPDDGSN NMESDFQLIS SGKLTGHHQS RADSLRAESA GRWVIVQDPL CSSLEPVAAA  360
GNRPVGPHAL KEMAQEDTHY SQTVSGILQN QRIRWAESSS LPYLSYSNQS AFTKCTNRCS  420
DHLLHLPIEG PSQWFLKYIL FSVPYLHHKY LEENSPKPRD GDDANRFRKG GAALDELSAN  480
HVLAERRRRE KLNERFMILR SLVPFVTKMD KASILGDTID YVKQLRQKIQ ELEARNRQME  540
IEQRSRLVDP PQRTSSLKEQ RSAVPVMDRA RIVPGYGPTS DKKKLRIVDG SGGCTKPKTV  600
ETSPLVEAET SVEVSIIECD ALLEIQCGYR EGLLLDIMQM LREIRIEITA VQSSLNNGVL  660
MAELRAKVKD NVAGKKVSIV KVKRAIHQII P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	490	ERRRRE
2	486	491	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-102	bHLH family protein