PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653285.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 690aa MW: 79996.7 Da PI: 6.3488

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.9	9.4e-25	69	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke d +w+v+++++ HnHel XP_021653285.1 69 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgDTQWYVSQFSNVHNHELL 160 69******************8888.**************************************99777899************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MKPSNNIWIR RQQCPCGDWK CYIKYEGDDQ TSMSSHLVKN ETPSISSSAE VVFTPYVGQI 60 FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGIYRRDF VCYRSGFNQP RKKANVEHPR 120 DRKSVRCGCD AKLYLTKEIV DGDTQWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQEADQE 180 RILLLSKAGF PVNRIVKVLE LEKGVQPGQL PFIEKDVRNF VRTCKKTVQE NDALLTEKRE 240 NDTLELLEAC KAMTERDADF AYDYTTDENE KVENIAWSYG DSVRACTIYG DVVTFDTSYR 300 SITYGLLLGM WFGMDNNGKA ILFGCVLLQD ESSDSFAWAL QSFVRFMRGR HPQTIITDID 360 SGLRDAIARE LANTKHIICI WHILSKLFSW FSFSLGSQYE DFKAEFDMLC RLESVEDFEH 420 QWNLLVARFG LASDKHMGLL FSYRGYWSFS CIRGYFLARS LTAEFSQCLD VFLKSILRGQ 480 TCLQVFFEQV ALAANFGNQS RDGMQYMHIK TSMPIEEHAR SVLTPYAFNV FQHEIILSLQ 540 YGTQEMADGS YLLRHYKKMD GECLVIWIPE EEQIHCSCKE FDQSGILCRH SLRVLSVKNY 600 FQLPEKYLPL RWRRKHSLLP MDDQNAQSNS DECAQTFHSL ASTLLTESLV SKERFTHVHR 660 ELTGLLDHVR TMPMTEEFSL NMTNNNISES

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MKPSNNIWIR RQQCPCGDWK CYIKYEGDDQ TSMSSHLVKN ETPSISSSAE VVFTPYVGQI  60
FKSDDDAFEY YSNFARKNGF SIRKARSTES QNLGIYRRDF VCYRSGFNQP RKKANVEHPR  120
DRKSVRCGCD AKLYLTKEIV DGDTQWYVSQ FSNVHNHELL EDDQVRLLPA YRKIQEADQE  180
RILLLSKAGF PVNRIVKVLE LEKGVQPGQL PFIEKDVRNF VRTCKKTVQE NDALLTEKRE  240
NDTLELLEAC KAMTERDADF AYDYTTDENE KVENIAWSYG DSVRACTIYG DVVTFDTSYR  300
SITYGLLLGM WFGMDNNGKA ILFGCVLLQD ESSDSFAWAL QSFVRFMRGR HPQTIITDID  360
SGLRDAIARE LANTKHIICI WHILSKLFSW FSFSLGSQYE DFKAEFDMLC RLESVEDFEH  420
QWNLLVARFG LASDKHMGLL FSYRGYWSFS CIRGYFLARS LTAEFSQCLD VFLKSILRGQ  480
TCLQVFFEQV ALAANFGNQS RDGMQYMHIK TSMPIEEHAR SVLTPYAFNV FQHEIILSLQ  540
YGTQEMADGS YLLRHYKKMD GECLVIWIPE EEQIHCSCKE FDQSGILCRH SLRVLSVKNY  600
FQLPEKYLPL RWRRKHSLLP MDDQNAQSNS DECAQTFHSL ASTLLTESLV SKERFTHVHR  660
ELTGLLDHVR TMPMTEEFSL NMTNNNISES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein