PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653371.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 533aa MW: 59480.6 Da PI: 8.5788

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.5e-19	21	75	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ q+ +Le+++++++yp++e++ eLA+++gLte+q++ WF+ rR k+k+ XP_021653371.1 21 KRILKTPAQIMALEKFYNEHNYPTEEMKSELAEQIGLTEKQISSWFCHRRLKDKR 75 78899************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MGDSNEVHSE ENGVSPEKNT KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAEQIGLTEK 60 QISSWFCHRR LKDKRLSKDE AFDKRLSKDE MCASGRQDRS SGIIQDRGSG LRQDSCGSTK 120 QGDYRKVDPK EVESQRLYGH NLPAADVTYD RTSRYTGNVN GTDDTSSESS SSLQDKLFSQ 180 SEDLHDMKDS GYVAHNGASK SLIPRGANKM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY 240 REDGPPLGVE FQPLPPGAFS SSSRDPVNAG AFYVGDLARI HSPDVSGVRK QSSLSSRYEV 300 YSSKMNSQDS YMEGPSCNLK NASDSHDKKS HHQIKRKSTS YDYSNCTPGG KSAMDKYDDL 360 AAETSIHSSK RNYKLSSMHG VEGIGPHTVS NHHHPDGGKA ISEQTDPWLH DYGNGSPNIV 420 QKNDYTSKSL NLITGFSKSL DAQERVLSTI TEKPYREIKG TKEYRDTVRV RMHPTNEMTI 480 SKRFRAEFSQ QQYVTKAAFP NMPRKTNSNK GSAIDRPSSF SEDETAETSS SVD

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MGDSNEVHSE ENGVSPEKNT KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAEQIGLTEK  60
QISSWFCHRR LKDKRLSKDE AFDKRLSKDE MCASGRQDRS SGIIQDRGSG LRQDSCGSTK  120
QGDYRKVDPK EVESQRLYGH NLPAADVTYD RTSRYTGNVN GTDDTSSESS SSLQDKLFSQ  180
SEDLHDMKDS GYVAHNGASK SLIPRGANKM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY  240
REDGPPLGVE FQPLPPGAFS SSSRDPVNAG AFYVGDLARI HSPDVSGVRK QSSLSSRYEV  300
YSSKMNSQDS YMEGPSCNLK NASDSHDKKS HHQIKRKSTS YDYSNCTPGG KSAMDKYDDL  360
AAETSIHSSK RNYKLSSMHG VEGIGPHTVS NHHHPDGGKA ISEQTDPWLH DYGNGSPNIV  420
QKNDYTSKSL NLITGFSKSL DAQERVLSTI TEKPYREIKG TKEYRDTVRV RMHPTNEMTI  480
SKRFRAEFSQ QQYVTKAAFP NMPRKTNSNK GSAIDRPSSF SEDETAETSS SVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-100	HB-other family protein