PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653523.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 196aa MW: 22063 Da PI: 8.5726

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.7e-05	23	45	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H XP_021653523.1 23 YTCSFCKRQFNSAQALGGHMNVH 45 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MERTCFGSEG DNSSGFLWPQ RNYTCSFCKR QFNSAQALGG HMNVHRRDRA MLIQLPSWVF 60 ECPNPNPNFS SSTSLSLSSS RSTSAKLLSY PCTPHHSLLS PSFTSFSSSP SYQDKKSTAL 120 ECPQRDSSTP LSEDLKKKKK KKSMRAVVEV EEFNKGFAQK YELEVLKKSE VISLDLEIGC 180 KDPKEVLDLE LRLGCF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	142	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42410.1	9e-25	C2H2 family protein