PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653620.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 475aa MW: 52933.6 Da PI: 6.5166

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	303	348	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YIk+L XP_021653620.1 303 NHVEAERQRRERLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIKEL 348 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEEIMSPSSS SSLLSFCQES SPPLQQRLQV ILQSRPGWWI YAIFWQASKD ASGRLVLSWG 60 DGNFHGSKDF AIKPSNKQNQ QHKFGFNLER KKVSKEFQAL FSDDMEMDRL ADADDADYGW 120 FYTVSATRSF AIGAGVLGQA FASGGFTWLT GDHELQLYEC ERVREARMHG IHTLACISTS 180 CGVVELGSSH MVNEDWSLVQ LCKSLFGADV ACLVSKQPSP ESHLQITDRG ATFLDIGMFS 240 GSQKETSPEK QNEVDKKKDA SGSGQGRSSS DSGPSDSDGN FAAITNQFKK RGRKPNGKEL 300 PLNHVEAERQ RRERLNHRFY ALRSVVPNVS KMDKASLLAD AVTYIKELKA KVDELEGKLQ 360 TVSKKSRIIN TSVYDNQSTN YMVDHLIPSS SYAAKAMEVD VKIVGSEAMI RVQSPDFNYP 420 AARLMDALRE LEFQVHHASV SSINEMVLQD VVVSIPEGLT NEEVMRSIIF QRMQN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEEIMSPSSS SSLLSFCQES SPPLQQRLQV ILQSRPGWWI YAIFWQASKD ASGRLVLSWG  60
DGNFHGSKDF AIKPSNKQNQ QHKFGFNLER KKVSKEFQAL FSDDMEMDRL ADADDADYGW  120
FYTVSATRSF AIGAGVLGQA FASGGFTWLT GDHELQLYEC ERVREARMHG IHTLACISTS  180
CGVVELGSSH MVNEDWSLVQ LCKSLFGADV ACLVSKQPSP ESHLQITDRG ATFLDIGMFS  240
GSQKETSPEK QNEVDKKKDA SGSGQGRSSS DSGPSDSDGN FAAITNQFKK RGRKPNGKEL  300
PLNHVEAERQ RRERLNHRFY ALRSVVPNVS KMDKASLLAD AVTYIKELKA KVDELEGKLQ  360
TVSKKSRIIN TSVYDNQSTN YMVDHLIPSS SYAAKAMEVD VKIVGSEAMI RVQSPDFNYP  420
AARLMDALRE LEFQVHHASV SSINEMVLQD VVVSIPEGLT NEEVMRSIIF QRMQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	314	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-66	bHLH family protein