PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653679.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 663aa MW: 73711.4 Da PI: 7.0949

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.4	1.3e-23	110	211	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + + XP_021653679.1 110 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAE 200 89**************************996555555..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021653679.1 201 NGDLFVGIRRA 211 8889**997 PP
2	Auxin_resp	114.6	9e-38	274	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa a+++++FevvY+Prast+eF+vk+++v++a++++++ GmRfkmafetedss+ ++ +Gtv++v+ +d +rWpnS+Wr+L+ XP_021653679.1 274 AAALAANGQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMAFETEDSSRVSWfMGTVASVQVSDLIRWPNSPWRLLQ 357 678899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MKELEKSLDP QLWHACSGSM VQIPPVNSRV FYFPQGHAEH SQSPVDFSSS LRIPALILCR 60 VAAVKYLADL ETDEVYAKIS LVALPNNELD FGEEMGICDN GNNTEKPASF AKTLTQSDAN 120 NGGGFSVPRY CAETIFPRLD YSADPPVQTV VAKDVHGEIW KFRHIYRGTP RRHLLTTGWS 180 TFVNQKKLVA GDSIVFLRAE NGDLFVGIRR AKRGSGIGNG PESSSPPSGW TANASYVKPY 240 GGFSLFLRED ENKGMRNGGL RGREKVRPEE VLEAAALAAN GQPFEVVYYP RASTPEFCVK 300 ASSVRAAMRI QWCSGMRFKM AFETEDSSRV SWFMGTVASV QVSDLIRWPN SPWRLLQVTW 360 DEPDLLQNVK RVNPWLVELV SNMPVIHLSP FSPPRKKLRL PQHLDFPLDG QFQWPSFLGN 420 PLGPSSPLCC LSDNTPAGIQ GARHAQFGIS LSDLQLNNKM QSGLFLSGLQ RFNSHSRISE 480 SFMKGHTNSN ENLSCLLTMG NSNTNSEKSD NVKTHQFLLF GQPILTEQQI SHSCSTDAVS 540 QVLSGKFSSD ESLEKAKCHY VLGSAHEKQT LPEKPANTGL SWQNLRNTET GLDAGQCKVF 600 LESEDVGRTL DLSVLGSYEE LHTRLAKMFG IERSDMFSHV LYRDAMGDVK RMGDEPFSGL 660 PWY

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MKELEKSLDP QLWHACSGSM VQIPPVNSRV FYFPQGHAEH SQSPVDFSSS LRIPALILCR  60
VAAVKYLADL ETDEVYAKIS LVALPNNELD FGEEMGICDN GNNTEKPASF AKTLTQSDAN  120
NGGGFSVPRY CAETIFPRLD YSADPPVQTV VAKDVHGEIW KFRHIYRGTP RRHLLTTGWS  180
TFVNQKKLVA GDSIVFLRAE NGDLFVGIRR AKRGSGIGNG PESSSPPSGW TANASYVKPY  240
GGFSLFLRED ENKGMRNGGL RGREKVRPEE VLEAAALAAN GQPFEVVYYP RASTPEFCVK  300
ASSVRAAMRI QWCSGMRFKM AFETEDSSRV SWFMGTVASV QVSDLIRWPN SPWRLLQVTW  360
DEPDLLQNVK RVNPWLVELV SNMPVIHLSP FSPPRKKLRL PQHLDFPLDG QFQWPSFLGN  420
PLGPSSPLCC LSDNTPAGIQ GARHAQFGIS LSDLQLNNKM QSGLFLSGLQ RFNSHSRISE  480
SFMKGHTNSN ENLSCLLTMG NSNTNSEKSD NVKTHQFLLF GQPILTEQQI SHSCSTDAVS  540
QVLSGKFSSD ESLEKAKCHY VLGSAHEKQT LPEKPANTGL SWQNLRNTET GLDAGQCKVF  600
LESEDVGRTL DLSVLGSYEE LHTRLAKMFG IERSDMFSHV LYRDAMGDVK RMGDEPFSGL  660
PWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein